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Use eigen methods for solving triangular systems. We loose again very
slightly on both speed and precision on some tests.
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@ -199,23 +199,12 @@ void ei_lmpar2(
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/* compute and store in x the gauss-newton direction. if the */
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/* compute and store in x the gauss-newton direction. if the */
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/* jacobian is rank-deficient, obtain a least squares solution. */
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/* jacobian is rank-deficient, obtain a least squares solution. */
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int nsing = n-1;
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// const int rank = qr.nonzeroPivots(); // exactly double(0.)
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wa1 = qtb;
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const int rank = qr.rank(); // use a threshold
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for (j = 0; j < n; ++j) {
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wa1 = qtb; wa1.segment(rank,n-rank).setZero();
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if (qr.matrixQR()(j,j) == 0. && nsing == n-1)
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qr.matrixQR().corner(TopLeft, rank, rank).template triangularView<Upper>().solveInPlace(wa1.head(rank));
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nsing = j - 1;
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if (nsing < n-1)
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wa1[j] = 0.;
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}
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for (j = nsing; j>=0; --j) {
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wa1[j] /= qr.matrixQR()(j,j);
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temp = wa1[j];
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for (i = 0; i < j ; ++i)
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wa1[i] -= qr.matrixQR()(i,j) * temp;
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}
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for (j = 0; j < n; ++j)
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x = qr.colsPermutation()*wa1;
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x[qr.colsPermutation().indices()(j)] = wa1[j];
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/* initialize the iteration counter. */
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/* initialize the iteration counter. */
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/* evaluate the function at the origin, and test */
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/* evaluate the function at the origin, and test */
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@ -235,19 +224,12 @@ void ei_lmpar2(
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/* the function. otherwise set this bound to zero. */
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/* the function. otherwise set this bound to zero. */
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parl = 0.;
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parl = 0.;
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if (nsing >= n-1) {
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if (rank==n) {
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for (j = 0; j < n; ++j) {
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for (j = 0; j < n; ++j) {
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l = qr.colsPermutation().indices()(j);
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l = qr.colsPermutation().indices()(j);
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wa1[j] = diag[l] * (wa2[l] / dxnorm);
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wa1[j] = diag[l] * (wa2[l] / dxnorm);
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}
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}
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// it's actually a triangularView.solveInplace(), though in a weird
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qr.matrixQR().corner(TopLeft, n, n).transpose().template triangularView<Lower>().solveInPlace(wa1);
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// way:
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for (j = 0; j < n; ++j) {
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Scalar sum = 0.;
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for (i = 0; i < j; ++i)
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sum += qr.matrixQR()(i,j) * wa1[i];
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wa1[j] = (wa1[j] - sum) / qr.matrixQR()(j,j);
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}
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temp = wa1.blueNorm();
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temp = wa1.blueNorm();
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parl = fp / delta / temp / temp;
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parl = fp / delta / temp / temp;
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}
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}
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@ -272,7 +254,7 @@ void ei_lmpar2(
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/* beginning of an iteration. */
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/* beginning of an iteration. */
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Matrix< Scalar, Dynamic, Dynamic > r = qr.matrixQR(); // TODO : fixme
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Matrix< Scalar, Dynamic, Dynamic > s = qr.matrixQR();
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while (true) {
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while (true) {
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++iter;
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++iter;
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@ -284,7 +266,7 @@ void ei_lmpar2(
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wa1 = ei_sqrt(par)* diag;
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wa1 = ei_sqrt(par)* diag;
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Matrix< Scalar, Dynamic, 1 > sdiag(n);
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Matrix< Scalar, Dynamic, 1 > sdiag(n);
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ei_qrsolv<Scalar>(r, qr.colsPermutation().indices(), wa1, qtb, x, sdiag);
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ei_qrsolv<Scalar>(s, qr.colsPermutation().indices(), wa1, qtb, x, sdiag);
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wa2 = diag.cwiseProduct(x);
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wa2 = diag.cwiseProduct(x);
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dxnorm = wa2.blueNorm();
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dxnorm = wa2.blueNorm();
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@ -308,7 +290,7 @@ void ei_lmpar2(
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wa1[j] /= sdiag[j];
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wa1[j] /= sdiag[j];
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temp = wa1[j];
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temp = wa1[j];
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for (i = j+1; i < n; ++i)
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for (i = j+1; i < n; ++i)
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wa1[i] -= r(i,j) * temp;
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wa1[i] -= s(i,j) * temp;
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}
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}
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temp = wa1.blueNorm();
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temp = wa1.blueNorm();
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parc = fp / delta / temp / temp;
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parc = fp / delta / temp / temp;
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@ -321,16 +303,8 @@ void ei_lmpar2(
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paru = std::min(paru,par);
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paru = std::min(paru,par);
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/* compute an improved estimate for par. */
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/* compute an improved estimate for par. */
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/* Computing MAX */
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par = std::max(parl,par+parc);
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par = std::max(parl,par+parc);
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/* end of an iteration. */
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}
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}
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/* termination. */
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if (iter == 0)
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if (iter == 0)
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par = 0.;
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par = 0.;
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return;
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return;
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@ -1,7 +1,8 @@
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template <typename Scalar>
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template <typename Scalar>
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void ei_qrsolv(
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void ei_qrsolv(
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Matrix< Scalar, Dynamic, Dynamic > &r,
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Matrix< Scalar, Dynamic, Dynamic > &s,
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// TODO : use a PermutationMatrix once ei_lmpar is no more:
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const VectorXi &ipvt,
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const VectorXi &ipvt,
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const Matrix< Scalar, Dynamic, 1 > &diag,
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const Matrix< Scalar, Dynamic, 1 > &diag,
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const Matrix< Scalar, Dynamic, 1 > &qtb,
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const Matrix< Scalar, Dynamic, 1 > &qtb,
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@ -11,21 +12,23 @@ void ei_qrsolv(
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{
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{
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/* Local variables */
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/* Local variables */
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int i, j, k, l;
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int i, j, k, l;
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Scalar sum, temp;
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Scalar temp;
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int n = r.cols();
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int n = s.cols();
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Matrix< Scalar, Dynamic, 1 > wa(n);
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Matrix< Scalar, Dynamic, 1 > wa(n);
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/* Function Body */
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/* Function Body */
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// the following will only change the lower triangular part of s, including
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// the diagonal, though the diagonal is restored afterward
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/* copy r and (q transpose)*b to preserve input and initialize s. */
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/* copy r and (q transpose)*b to preserve input and initialize s. */
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/* in particular, save the diagonal elements of r in x. */
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/* in particular, save the diagonal elements of r in x. */
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x = r.diagonal();
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x = s.diagonal();
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wa = qtb;
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wa = qtb;
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for (j = 0; j < n; ++j)
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for (j = 0; j < n; ++j)
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for (i = j+1; i < n; ++i)
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for (i = j+1; i < n; ++i)
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r(i,j) = r(j,i);
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s(i,j) = s(j,i);
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/* eliminate the diagonal matrix d using a givens rotation. */
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/* eliminate the diagonal matrix d using a givens rotation. */
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for (j = 0; j < n; ++j) {
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for (j = 0; j < n; ++j) {
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@ -48,43 +51,37 @@ void ei_qrsolv(
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/* determine a givens rotation which eliminates the */
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/* determine a givens rotation which eliminates the */
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/* appropriate element in the current row of d. */
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/* appropriate element in the current row of d. */
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PlanarRotation<Scalar> givens;
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PlanarRotation<Scalar> givens;
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givens.makeGivens(-r(k,k), sdiag[k]);
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givens.makeGivens(-s(k,k), sdiag[k]);
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/* compute the modified diagonal element of r and */
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/* compute the modified diagonal element of r and */
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/* the modified element of ((q transpose)*b,0). */
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/* the modified element of ((q transpose)*b,0). */
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r(k,k) = givens.c() * r(k,k) + givens.s() * sdiag[k];
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s(k,k) = givens.c() * s(k,k) + givens.s() * sdiag[k];
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temp = givens.c() * wa[k] + givens.s() * qtbpj;
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temp = givens.c() * wa[k] + givens.s() * qtbpj;
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qtbpj = -givens.s() * wa[k] + givens.c() * qtbpj;
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qtbpj = -givens.s() * wa[k] + givens.c() * qtbpj;
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wa[k] = temp;
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wa[k] = temp;
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/* accumulate the tranformation in the row of s. */
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/* accumulate the tranformation in the row of s. */
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for (i = k+1; i<n; ++i) {
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for (i = k+1; i<n; ++i) {
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temp = givens.c() * r(i,k) + givens.s() * sdiag[i];
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temp = givens.c() * s(i,k) + givens.s() * sdiag[i];
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sdiag[i] = -givens.s() * r(i,k) + givens.c() * sdiag[i];
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sdiag[i] = -givens.s() * s(i,k) + givens.c() * sdiag[i];
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r(i,k) = temp;
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s(i,k) = temp;
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}
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}
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}
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}
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}
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}
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// restore
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sdiag = r.diagonal();
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r.diagonal() = x;
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/* solve the triangular system for z. if the system is */
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/* solve the triangular system for z. if the system is */
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/* singular, then obtain a least squares solution. */
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/* singular, then obtain a least squares solution. */
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int nsing;
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int nsing;
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for (nsing=0; nsing<n && sdiag[nsing]!=0; nsing++);
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for (nsing=0; nsing<n && sdiag[nsing]!=0; nsing++);
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wa.segment(nsing,n-nsing).setZero();
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wa.segment(nsing,n-nsing).setZero();
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nsing--; // nsing is the last nonsingular index
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for (j = nsing; j>=0; j--) {
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s.corner(TopLeft, nsing, nsing).transpose().template triangularView<Upper>().solveInPlace(wa.head(nsing));
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sum = 0.;
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for (i = j+1; i <= nsing; ++i)
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// restore
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sum += r(i,j) * wa[i];
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sdiag = s.diagonal();
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wa[j] = (wa[j] - sum) / sdiag[j];
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s.diagonal() = x;
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}
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/* permute the components of z back to components of x. */
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/* permute the components of z back to components of x. */
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for (j = 0; j < n; ++j) x[ipvt[j]] = wa[j];
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for (j = 0; j < n; ++j) x[ipvt[j]] = wa[j];
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@ -1010,7 +1010,7 @@ void testNistLanczos1(void)
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VERIFY( 79 == lm.nfev);
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VERIFY( 79 == lm.nfev);
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VERIFY( 72 == lm.njev);
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VERIFY( 72 == lm.njev);
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// check norm^2
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// check norm^2
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VERIFY_IS_APPROX(lm.fvec.squaredNorm(), 1.428127827535E-25); // should be 1.4307867721E-25, but nist results are on 128-bit floats
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VERIFY_IS_APPROX(lm.fvec.squaredNorm(), 1.427932429905E-25); // should be 1.4307867721E-25, but nist results are on 128-bit floats
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// check x
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// check x
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VERIFY_IS_APPROX(x[0], 9.5100000027E-02 );
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VERIFY_IS_APPROX(x[0], 9.5100000027E-02 );
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VERIFY_IS_APPROX(x[1], 1.0000000001E+00 );
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VERIFY_IS_APPROX(x[1], 1.0000000001E+00 );
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@ -1332,8 +1332,8 @@ void testNistMGH17(void)
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// check return value
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// check return value
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VERIFY( 2 == info);
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VERIFY( 2 == info);
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VERIFY( 603 == lm.nfev);
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VERIFY( 606 == lm.nfev);
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VERIFY( 544 == lm.njev);
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VERIFY( 545 == lm.njev);
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// check norm^2
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// check norm^2
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VERIFY_IS_APPROX(lm.fvec.squaredNorm(), 5.4648946975E-05);
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VERIFY_IS_APPROX(lm.fvec.squaredNorm(), 5.4648946975E-05);
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// check x
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// check x
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